Resources

Software

  • NHP-BIDS is a NiPype based pipeline for (pre-)processing of NHP-fMRI data in accordance with BIDS It is available on GitHub.
  • NHP-Freesurfer is a shell-based pipeline written in Jupyter notebooks for the segmentation and surface generation of NHP MRI data. It is available on GitHub.
  • RheMAP is a package on non-linear registrations across a set of common rhesus macaque brain templates. Code is available on GitHub, warp-files on Zenodo.DOI
  • PRIME-RE is a community driven platform for sharing resources related to NHP neuroimaging. Find it here.

Data

  • PRIME-DE is a platform for the sharing of NHP neuroimaging data. The future is collaborative! Find it here.
  • RheMAP is a package on non-linear registrations across a set of common rhesus macaque brain templates. Code is available on GitHub, warp-files on Zenodo. DOI